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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7638650_7668647_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7638650 - 7668647

Intron Length:

29998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGAGAAGGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGACAT

U12 Branch Point Sequence:

TAGACATTGAGA

Flanking Amino Acid:

GNKGSDGFHEDGKPCRHCCA

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.6

39.1

Major BPS

59.8

0.24

1.2

39.8

Major PPT

41.7

-0.4

1.7

40.6

47.1

Minor 5ss

-2.2

3.3

40.9

45.3

Minor BPS

46.9

-0.2

1.9

57.23

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022466

7611723 - 7668878

57156

ENSAPLT00000027209

7619700 - 7668878

49179