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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76388909_76393786_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
76388909 - 76393786

Intron Length:
4878

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACATTAG

5'SS Class:
major

3'SS Sequence:
AAATCTCTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CATTTTTTAATG

Flanking Amino Acid:
INDVCLYPNSGMLMTANEAP

Intron Amino Acid Position:
325

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1
68.4
39.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
68.9
0.43
0.9
59.6
41.7

Minor 5ss
37.8
-1.4
3.1
48.8
47.4

Minor BPS
65.9
0.36
1.3
63.33
39.5

Associated Gene:

Gene:
NOL10

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76375554 - 76421560
46007

76375554 - 76423142
47589

76375554 - 76420038
44485