Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76415539_76420651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76415539 - 76420651

Intron Length:

5113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CTAACATTAATT

Flanking Amino Acid:

KDSAKKQKLMKKTLGDRLKL

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

74.5

35.9

Major BPS

76.9

0.67

66.3

40.4

Major PPT

81.9

0.72

0.8

77.6

30.9

Minor 5ss

37.3

-1.4

3.2

48.7

41.3

Minor BPS

61.1

0.43

1.7

74.97

41.6

Associated Gene:

Gene:

NOL10

Ensembl Gene ID:

ENSAPLG00000009885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031365

76375554 - 76421560

46007

ENSAPLT00000010376

76375554 - 76423142

47589