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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76457211_76494484_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
76457211 - 76494484

Intron Length:
37274

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAGGTACA

5'SS Class:
major

3'SS Sequence:
CTTTCTGTATCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTTAT

U12 Branch Point Sequence:
CTTTCTGTATCA

Flanking Amino Acid:
LEKGDLRQNHSICTQVLLHK

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66
0.38
1.2
64.9
40.8

Major BPS
65.9
0.39
1.2
57.6
41.3

Major PPT
78.1
0.63
0.9
77.6
35.4

Minor 5ss
37.5
-1.4
3
52.7
44

Minor BPS
50.9
0.02
2.2
70.42
42.6

Associated Gene:

Gene:
ODC1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76457110 - 76500422
43313