Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76494634_76494739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76494634 - 76494739

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GTATTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCGGTTGTAACT

Flanking Amino Acid:

DQKINEVSSSDDKDAFYVAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

70.9

0.47

62.7

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

48.1

-0

2.1

45.6

Associated Gene:

Gene:

ODC1

Ensembl Gene ID:

ENSAPLG00000009531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009969

76457110 - 76500422

43313