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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76539389_76545051_R

Intron Information:

Intron Rank:

146438

Intron Class:

major

Intron Phase:

Intron Coordinates:

76539389 - 76545051

Intron Length:

5663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CGCTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTCGCTTCTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

82.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.7

0.8

72.4

37.8

Minor 5ss

33.1

-1.9

2.7

40.7

39.2

Minor BPS

35.9

-0.9

3.6

64.57

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035704

76536368 - 76552896

16529