Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76756219_76757329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76756219 - 76757329

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGCTACTGACGC

Flanking Amino Acid:

IDTYIKDSKEREFLFNAIET

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

-1.7

3.3

46.3

Minor BPS

42.7

-0.5

2.1

52.78

44.3

Associated Gene:

Gene:

RRM2

Ensembl Gene ID:

ENSAPLG00000009301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020948

76737259 - 76758726

21468

ENSAPLT00000009691

76714721 - 76758726

44006