Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76758066_76758245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76758066 - 76758245

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCACGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TCTCTCTTATTA

Flanking Amino Acid:

AEASFWTAEEVDLSKDIQHW

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

80.6

0.69

0.9

77.2

36.7

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

59.3

0.29

1.6

67.92

39.1

Associated Gene:

Gene:

RRM2

Ensembl Gene ID:

ENSAPLG00000009301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020948

76737259 - 76758726

21468

ENSAPLT00000009691

76714721 - 76758726

44006