About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76758556_76758633_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
76758556 - 76758633

Intron Length:
78

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGCGGC

5'SS Class:
major

3'SS Sequence:
GCTCTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAC

U12 Branch Point Sequence:
CCTCTCTCACCG

Flanking Amino Acid:
GLALGDKENTPPAASSSRVL

Intron Amino Acid Position:
32

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
57.9
41.8

Major BPS
72.7
0.56
1
75
30.1

Major PPT
72.3
0.5
0.8
65.6
30.3

Minor 5ss
31.7
-2.1
3.3
41.6
45.3

Minor BPS
45.1
-0.5
1.9
48.07
45.5

Associated Gene:

Gene:
RRM2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76737259 - 76758726
21468