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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76782624_76784006_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
76782624 - 76784006

Intron Length:
1383

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGAGAA

5'SS Class:
strong_major

3'SS Sequence:
TCTCTTTGTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTGTGAA

U12 Branch Point Sequence:
CGTTGTGTAACG

Flanking Amino Acid:
ELPKDYLSTLCMTPPHSPDF

Intron Amino Acid Position:
100

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.5
0.79
0.9
73.1
31.1

Major BPS
59.7
0.24
1.2
52.7
43.2

Major PPT
83.5
0.75
0.8
79.9
32.1

Minor 5ss
29.9
-2.3
3.3
35
42.5

Minor BPS
45.6
-0.4
2.4
55.14
46.4

Associated Gene:

Gene:
KLF11

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76778845 - 76786566
7722

76775649 - 76786566
10918