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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76806333_76807314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76806333 - 76807314

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCCTTTCTAACA

Flanking Amino Acid:

HTAKQRCIDIADYKESFNTI

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

80.2

0.68

0.8

76.7

30.6

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

57.5

0.23

1.7

66.77

40.3

Associated Gene:

Gene:

GRHL1

Ensembl Gene ID:

ENSAPLG00000008667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009048

76789189 - 76814943

25755

ENSAPLT00000047531

76789159 - 76815435

26277

ENSAPLT00000025469

76789189 - 76813639

24451