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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76823902_76827371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76823902 - 76827371

Intron Length:

3470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATAGATT

Flanking Amino Acid:

WLCTIRLCREKLCGHLAHYK

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

93.4

0.98

0.6

92.1

18.5

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

45.4

-0.2

2.3

70.06

41.3

Associated Gene:

Gene:

TAF1B

Ensembl Gene ID:

ENSAPLG00000008537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008900

76823712 - 76871430

47719