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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76827598_76829806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76827598 - 76829806

Intron Length:

2209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTATTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATTT

Flanking Amino Acid:

KKKSKVLRRRQMVVNLQNQF

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.2

79.3

31.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

80.6

0.69

0.9

76.4

37.5

Minor 5ss

-2.2

2.6

32.5

35.1

Minor BPS

81.5

1.07

1.4

95.91

30.5

Associated Gene:

Gene:

TAF1B

Ensembl Gene ID:

ENSAPLG00000008537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008900

76823712 - 76871430

47719