Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76867033_76867584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76867033 - 76867584

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTACAAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAAAAACA

Flanking Amino Acid:

PAGETVKALSVCDSSTDMDS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

71.7

33.7

Major BPS

73.5

0.59

81.3

29.9

Major PPT

62.6

0.28

1.1

41.4

Minor 5ss

34.2

-1.8

3.2

45.6

43.6

Minor BPS

-0.1

2.2

70.68

40.9

Associated Gene:

Gene:

TAF1B

Ensembl Gene ID:

ENSAPLG00000008537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008900

76823712 - 76871430

47719