Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7691428_7691934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7691428 - 7691934

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

TTTCCCTTGTTC

Flanking Amino Acid:

KLTGHKRTHTGERLFKCDVC

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

81.3

32.8

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

77.5

0.62

0.8

75.2

33.2

Minor 5ss

36.8

-1.5

3.5

49.2

Minor BPS

47.4

-0.2

3.5

75.13

35.7

Associated Gene:

Gene:

GZF1

Ensembl Gene ID:

ENSAPLG00000027566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038645

7681512 - 7697298

15787

ENSAPLT00000033890

7677753 - 7697299

19547