Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76969257_76969302_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

76969257 - 76969302

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGGGGG

5'SS Class:

major

3'SS Sequence:

CTCTAGCATCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTAGCAT

U12 Branch Point Sequence:

TCATCTCTAGCA

Flanking Amino Acid:

NLLSVAYKNVQKTDTSDKKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

47.5

42.9

Major BPS

50.9

0.02

1.5

63.4

42.8

Major PPT

48.4

-0

1.7

50.5

42.8

Minor 5ss

21.9

-3.2

3.4

24.9

39.7

Minor BPS

50.4

0.01

1.9

64.79

41.6

Associated Gene:

Gene:

YWHAQ

Ensembl Gene ID:

ENSAPLG00000023697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019541

76969104 - 76988900

19797