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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77052699_77054596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77052699 - 77054596

Intron Length:

1898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAAAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

TGTTCCACTACA

Flanking Amino Acid:

LNFRGEKLAKVMGSLADKKP

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

75.8

33.1

Major BPS

61.4

0.28

1.1

36.5

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

40.6

-1.1

57.1

47.2

Minor BPS

49.4

-0

2.1

70.14

41.2

Associated Gene:

Gene:

CPSF3

Ensembl Gene ID:

ENSAPLG00000006941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007257

77045993 - 77056823

10831