Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77088266_77088710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77088266 - 77088710

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTATT

Flanking Amino Acid:

TEKIPLANGHEQDETALHLA

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.7

0.67

0.8

78.5

34.3

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

63.1

0.49

1.8

84.66

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047999

77079286 - 77136406

57121

ENSAPLT00000006919

77079286 - 77136406

57121