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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7720_16321_F

Intron Information:

Intron Rank:

149698

Intron Class:

major

Intron Phase:

Intron Coordinates:

7720 - 16321

Intron Length:

8602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGGAAC

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAC

U12 Branch Point Sequence:

TAGTGGTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.3

41.8

Major BPS

57.7

0.19

1.2

66.7

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

31.6

-2.1

3.4

42.7

44.7

Minor BPS

47.2

-0.2

2.4

62.8

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035046

6235 - 16571

10337