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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77280641_77285725_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
77280641 - 77285725

Intron Length:
5085

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGATGT

5'SS Class:
major

3'SS Sequence:
TTAAACTTTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TTATCTTAAACT

Flanking Amino Acid:
KYEQTDPSPNIAVAQKLLVC

Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
74.5
36.6

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
77.7
0.62
0.9
73.9
41

Minor 5ss
42.1
-0.9
3.2
61
43.6

Minor BPS
73.6
0.82
1.6
88.57
36.5

Associated Gene:

Gene:
MBOAT2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

77219880 - 77297718
77839

77218141 - 77297718
79578