Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77313225_77316301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

77313225 - 77316301

Intron Length:

3077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TTCTGGAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTTTCTGGAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

71.4

35.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

69.2

0.43

42.5

Minor 5ss

41.8

-0.9

2.7

47.2

42.3

Minor BPS

56.4

0.2

2.1

75.76

Associated Gene:

Gene:

KIDINS220

Ensembl Gene ID:

ENSAPLG00000015856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048093

77313161 - 77379900

66740

ENSAPLT00000016591

77313161 - 77379900

66740