About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77327602_77328253_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
77327602 - 77328253

Intron Length:
652

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTACA

5'SS Class:
strong_major

3'SS Sequence:
AATACTTTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTAAT

U12 Branch Point Sequence:
TCAAATTTAAGT

Flanking Amino Acid:
KYADIDIRGQDNKTALYWAV

Intron Amino Acid Position:
302

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.1
1.11
0.7
89.8
22.5

Major BPS
75.6
0.64
1.1
75.7
36.5

Major PPT
77.9
0.63
0.9
73.9
40.5

Minor 5ss
36
-1.6
2.6
43.5
43.6

Minor BPS
49.4
0.04
1.8
66.23
44.3

Associated Gene:

Gene:
KIDINS220

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

77313161 - 77379900
66740

77316302 - 77379900
63599

77316302 - 77379900
63599

77316302 - 77379900
63599

77316302 - 77379900
63599

77313161 - 77379900
66740