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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77328353_77329124_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
77328353 - 77329124

Intron Length:
772

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTATT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCCTTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
CCGTTTTTAAGT

Flanking Amino Acid:
CNPDTEICTKDGETPLIKAT

Intron Amino Acid Position:
335

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.7
0.94
0.8
93.7
19.8

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
90.4
0.91
0.6
89.7
18.7

Minor 5ss
43.4
-0.7
2.9
60.8
37.6

Minor BPS
55.6
0.25
1.7
66
45.6

Associated Gene:

Gene:
KIDINS220

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

77316302 - 77379900
63599

77316302 - 77379900
63599

77316302 - 77379900
63599

77313161 - 77379900
66740

77313161 - 77379900
66740

77316302 - 77379900
63599