Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77338572_77339213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77338572 - 77339213

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTTAG

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CCTTTCTTACAG

Flanking Amino Acid:

QDKVLQMLDTVRVLFSKGPF

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

64.3

38.1

Major BPS

76.8

0.67

0.9

75.9

Major PPT

88.3

0.86

0.7

83.2

25.4

Minor 5ss

-1.5

2.9

46.2

Minor BPS

49.9

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

KIDINS220

Ensembl Gene ID:

ENSAPLG00000015856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026916

77316302 - 77379900

63599

ENSAPLT00000025509

77316302 - 77379900

63599

ENSAPLT00000023465

77316302 - 77379900

63599

ENSAPLT00000048093

77313161 - 77379900

66740

ENSAPLT00000016591

77313161 - 77379900

66740

ENSAPLT00000032974

77316302 - 77379900

63599