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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77340159_77342287_F

Intron Information:

Intron Rank:
21
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
77340159 - 77342287
Intron Length:
2129

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGTGTG
5'SS Class:
strong_major
3'SS Sequence:
CTTGTTGTATTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AACAAAC
U12 Branch Point Sequence:
TCTTGTTGTATT
Flanking Amino Acid:
RRLLNIVSVTGRLLRANQIT
Intron Amino Acid Position:
951

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
96
1.08
0.7
85.2
32.2
Major BPS
50.8
0.02
0.9
57
25.1
Major PPT
70.6
0.46
1
70.3
40.1
Minor 5ss
36.3
-1.6
3.3
48.7
47.5
Minor BPS
46
-0.2
2.1
67.79
43.6

Associated Gene:

Gene:
KIDINS220
Ensembl Gene ID:
ENSAPLG00000015856
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000016591
77313161 - 77379900
66740
ENSAPLT00000032974
77316302 - 77379900
63599
ENSAPLT00000026916
77316302 - 77379900
63599
ENSAPLT00000025509
77316302 - 77379900
63599
ENSAPLT00000023465
77316302 - 77379900
63599
ENSAPLT00000048093
77313161 - 77379900
66740