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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77361394_77374298_F


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
77361394 - 77374298

Intron Length:
12905

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAATAAT

5'SS Class:
major

3'SS Sequence:
TCACTTCTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
GTTTTCTCACTT

Flanking Amino Acid:
TGPQHPFYNRGGGAGTGSTT

Intron Amino Acid Position:
1141

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
80.3
34.3

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
81.9
0.72
0.8
76
32.4

Minor 5ss
36.3
-1.6
2.9
42.5
44.5

Minor BPS
56.1
0.27
1.8
76.39
40.7

Associated Gene:

Gene:
KIDINS220

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

77316302 - 77379900
63599