Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_77366398_77371179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77366398 - 77371179

Intron Length:

4782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCCTCCTCAAAG

Flanking Amino Acid:

SLSRDQNNGLPCKSGLNRQR

Intron Amino Acid Position:

1178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

69.8

0.45

70.5

27.9

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

57.1

0.08

1.8

60.81

46.6

Associated Gene:

Gene:

KIDINS220

Ensembl Gene ID:

ENSAPLG00000015856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026916

77316302 - 77379900

63599