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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77462953_77463503_F

Intron Information:

Intron Rank:

127694

Intron Class:

major

Intron Phase:

Intron Coordinates:

77462953 - 77463503

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCTAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTCTAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.3

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.56

70.7

39.8

Minor 5ss

28.6

-2.5

2.8

41.8

Minor BPS

45.9

-0.3

1.9

60.01

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048493

77458481 - 77463631

5151

ENSAPLT00000046194

77458879 - 77463631

4753