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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77669840_77712582_F

Intron Information:

Intron Rank:

136233

Intron Class:

major

Intron Phase:

Intron Coordinates:

77669840 - 77712582

Intron Length:

42743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCTGACTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

92.1

0.95

0.7

85.1

34.9

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

48.2

-0.1

1.9

61.94

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018100

77666894 - 77713088

46195