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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77798906_77803900_R

Intron Information:

Intron Rank:

148151

Intron Class:

major

Intron Phase:

Intron Coordinates:

77798906 - 77803900

Intron Length:

4995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCACCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

TTACAAACAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

60.9

0.25

60.3

28.3

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

-0.6

2.1

58.3

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019937

77798379 - 77813334

14956