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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77845007_77854382_F

Intron Information:

Intron Rank:

125090

Intron Class:

major

Intron Phase:

Intron Coordinates:

77845007 - 77854382

Intron Length:

9376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTCTGAGAGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

79.9

0.67

0.9

75.8

32.7

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

31.6

-1.4

2.6

46.5

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035031

77844145 - 77854540

10396