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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77941750_77941891_F

Intron Information:

Intron Rank:

143408

Intron Class:

major

Intron Phase:

Intron Coordinates:

77941750 - 77941891

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GATGCATGAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

82.4

0.73

0.9

73.6

41.2

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

46.9

-0.3

1.9

51.76

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038814

77940282 - 77977716

37435

ENSAPLT00000022749

77940282 - 77977716

37435

ENSAPLT00000020595

77940562 - 77945218

4657