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Intron Name: Anas_platyrhynchos_platyrhynchos_3_77941950_77977477_F

Intron Information:

Intron Rank:

143412

Intron Class:

major

Intron Phase:

Intron Coordinates:

77941950 - 77977477

Intron Length:

35528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGA

5'SS Class:

major

3'SS Sequence:

CTTTTTTATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.7

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.3

0.84

0.8

81.1

35.6

Minor 5ss

38.4

-1.3

2.9

49.8

Minor BPS

65.1

0.45

1.6

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022749

77940282 - 77977716

37435