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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_78080662_78090583_R

Intron Information:

Intron Rank:
130350
Intron Class:
major
Intron Phase:
Intron Coordinates:
78080662 - 78090583
Intron Length:
9922

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTGTGATTC
5'SS Class:
major
3'SS Sequence:
TCTGTCTTGACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TCTGTCTTGACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
70.8
0.49
1
64.7
36.2
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
75.9
0.58
1
72
38
Minor 5ss
42.7
-0.8
3
50.5
46.2
Minor BPS
68.1
0.56
1.4
73.38
39

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017376
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000038110
78077415 - 78090652
13238