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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78197717_78211239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78197717 - 78211239

Intron Length:

13523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTCCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GAATAGTTAAGT

Flanking Amino Acid:

AQCQCIFCTLCLKQYVELLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

83.8

0.84

73.6

41.8

Major PPT

72.9

0.52

0.9

36.5

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

45.4

-0.2

2.4

64.04

45.4

Associated Gene:

Gene:

RNF144A

Ensembl Gene ID:

ENSAPLG00000006187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033616

78189298 - 78231953

42656

ENSAPLT00000006421

78189553 - 78211836

22284