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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78349639_78350185_F

Intron Information:

Intron Rank:

135007

Intron Class:

major

Intron Phase:

Intron Coordinates:

78349639 - 78350185

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

TTTTCTTTTTCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

0.2

1.3

67.7

36.5

Major PPT

85.5

0.8

0.6

80.4

31.6

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

46.8

-0.2

3.6

78.32

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040398

78349526 - 78355834

6309