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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78354227_78355668_F

Intron Information:

Intron Rank:

135006

Intron Class:

major

Intron Phase:

Intron Coordinates:

78354227 - 78355668

Intron Length:

1442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

TTCTCCATTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TCATCCCTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

80.8

34.4

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

82.4

0.73

0.8

35.3

Minor 5ss

47.2

-0.3

3.2

70.8

39.9

Minor BPS

66.4

0.6

1.7

81.02

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040398

78349526 - 78355834

6309

ENSAPLT00000039053

78349458 - 78358628

9171