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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78562641_78565327_R

Intron Information:

Intron Rank:

144329

Intron Class:

major

Intron Phase:

Intron Coordinates:

78562641 - 78565327

Intron Length:

2687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TCTACATCACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

74.9

0.62

81.3

29.9

Major PPT

82.9

0.74

0.9

80.3

37.3

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

43.4

-0.4

2.1

63.7

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033476

78562353 - 78567467

5115