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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78565404_78567318_R

Intron Information:

Intron Rank:

144328

Intron Class:

major

Intron Phase:

Intron Coordinates:

78565404 - 78567318

Intron Length:

1915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGACCA

5'SS Class:

major

3'SS Sequence:

TTTTGATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AAATCCCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

67.3

37.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.9

0.67

77.7

40.6

Minor 5ss

34.7

-1.7

3.1

45.5

42.2

Minor BPS

0.67

1.7

82.06

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033476

78562353 - 78567467

5115

ENSAPLT00000029653

78547645 - 78567467

19823