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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78629480_78630889_F

Intron Information:

Intron Rank:

125810

Intron Class:

major

Intron Phase:

Intron Coordinates:

78629480 - 78630889

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCTTCTTCCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

81.5

32.7

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

77.1

0.61

0.8

70.7

34.8

Minor 5ss

37.6

-1.4

3.3

48.3

41.3

Minor BPS

55.2

0.15

70.01

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042151

78626481 - 78631047

4567