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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78906959_78912745_R

Intron Information:

Intron Rank:

132710

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78906959 - 78912745

Intron Length:

5787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GGGAACTCCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGAAT

U12 Branch Point Sequence:

TTCTCGGGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

62.9

0.32

1.5

72.3

40.4

Major PPT

51.8

0.04

42.9

38.3

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

46.8

-0.1

2.7

76.42

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035822

78906745 - 78914860

8116