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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78950300_78967011_F

Intron Information:

Intron Rank:

135883

Intron Class:

major

Intron Phase:

Intron Coordinates:

78950300 - 78967011

Intron Length:

16712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TCATTGTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

-0.6

2.3

49.14

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037139

78839369 - 78967259

127891

ENSAPLT00000029397

78925935 - 78967259

41325