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Intron Name: Anas_platyrhynchos_platyrhynchos_3_78984609_78993025_R

Intron Information:

Intron Rank:

148199

Intron Class:

major

Intron Phase:

Intron Coordinates:

78984609 - 78993025

Intron Length:

8417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ACCTCCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAC

U12 Branch Point Sequence:

CTCCCCCCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

77.7

31.7

Major BPS

47.3

-0.1

1.3

54.7

40.3

Major PPT

65.8

0.36

0.7

62.6

27.7

Minor 5ss

41.3

-1

2.5

47.2

43.7

Minor BPS

43.7

-0.4

2.1

62.31

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037654

78984575 - 79007370

22796

ENSAPLT00000034263

78984575 - 79026821

42247