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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79079939_79084000_R

Intron Information:

Intron Rank:

133038

Intron Class:

major

Intron Phase:

Intron Coordinates:

79079939 - 79084000

Intron Length:

4062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

AACCTTTCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

91.8

0.94

0.6

84.7

30.2

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

49.3

-0

1.5

55.2

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035975

79071354 - 79084545

13192