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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79326059_79326168_R

Intron Information:

Intron Rank:

133960

Intron Class:

major

Intron Phase:

Intron Coordinates:

79326059 - 79326168

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCATCTAG

5'SS Class:

major

3'SS Sequence:

TTCCTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TAATGTTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.4

58.6

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.78

0.7

84.1

23.9

Minor 5ss

38.7

-1.3

2.9

47.4

Minor BPS

45.5

-0.5

2.1

52.68

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022399

79320814 - 79326246

5433