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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79688566_79689639_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79688566 - 79689639

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTCTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTCTGTTGAAAT

Flanking Amino Acid:

RQTNQRAEIHAACKAIEQAK

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

71.6

0.54

33.1

Major PPT

59.8

0.22

1.1

61.5

43.8

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

50.8

0.1

73.72

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002006

79685330 - 79693617

8288