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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79712482_79715647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79712482 - 79715647

Intron Length:

3166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTCTCACAATT

Flanking Amino Acid:

LSGIGRIFLQIGDIKTAEKY

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

92.6

23.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

76.8

0.6

0.9

41.4

Minor 5ss

47.8

-0.2

2.5

68.3

42.6

Minor BPS

54.4

0.22

1.8

78.58

37.5

Associated Gene:

Gene:

TRAPPC12

Ensembl Gene ID:

ENSAPLG00000000576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026143

79709353 - 79762895

53543

ENSAPLT00000022547

79709802 - 79763036

53235

ENSAPLT00000000839

79709907 - 79762900

52994