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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79726765_79733919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79726765 - 79733919

Intron Length:

7155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACT

5'SS Class:

major

3'SS Sequence:

AAATTTACTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTTACTTTAAAA

Flanking Amino Acid:

LHSMKIICAKILENLEQGLA

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

78.1

36.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

70.9

0.47

63.3

41.9

Minor 5ss

41.7

-0.9

2.9

59.3

44.8

Minor BPS

68.1

0.56

1.4

74.46

36.5

Associated Gene:

Gene:

TRAPPC12

Ensembl Gene ID:

ENSAPLG00000000576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035481

79709907 - 79763036

53130

ENSAPLT00000026143

79709353 - 79762895

53543

ENSAPLT00000022547

79709802 - 79763036

53235