Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_79822903_79824183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79822903 - 79824183

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGAACAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

PVKTLEEHSHWVWNVRYNHS

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.1

53.8

39.1

Major BPS

63.3

0.33

1.2

39.8

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

29.4

-2.4

3.4

34.9

43.5

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

EIPR1

Ensembl Gene ID:

ENSAPLG00000016100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045778

79762904 - 79838129

75226

ENSAPLT00000016819

79774247 - 79836098

61852