Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_79824460_79835923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79824460 - 79835923

Intron Length:

11464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

EEKIFVYRPFRIKEPLQDSV

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

83.2

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

EIPR1

Ensembl Gene ID:

ENSAPLG00000016100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016819

79774247 - 79836098

61852